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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2206627_2228797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2206627 - 2228797

Intron Length:

22171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

TCTTGGTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTGTTTTTCTCT

Flanking Amino Acid:

MEGWTDILYNTNDAAGNTWN

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

68.8

43.8

Major BPS

0.6

1.2

75.9

36.3

Major PPT

81.6

0.71

0.9

72.6

42.4

Minor 5ss

33.8

-1.8

40.5

38.8

Minor BPS

42.7

-0.4

3.5

74.5

43.2

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019