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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2241637_2250402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2241637 - 2250402

Intron Length:

8766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGATAAA

U12 Branch Point Sequence:

TTTCCTCTTACA

Flanking Amino Acid:

NGYLEWIFKAEEVMLAEEDK

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

51.1

0.03

1.2

53.7

38.6

Major PPT

89.4

0.89

0.6

24.1

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

54.2

0.12

73.88

37.1

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019