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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2253243_2257031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2253243 - 2257031

Intron Length:

3789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACC

5'SS Class:

strong_major

3'SS Sequence:

CCCCACTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

TTTGCCCCACTG

Flanking Amino Acid:

SKNDLIHAEEGSPFARASLK

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.6

33.8

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

61.5

0.26

0.9

52.5

36.4

Minor 5ss

28.1

-2.5

34.6

41.4

Minor BPS

43.6

-0.6

2.2

56.02

45.6

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019