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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2264648_2267682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2264648 - 2267682

Intron Length:

3035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

CCTTCTATAAAA

Flanking Amino Acid:

HSSFNCFDFGVIVGSIFEVI

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

43.8

Major BPS

65.3

0.38

71.6

30.1

Major PPT

83.3

0.75

0.8

77.3

30.6

Minor 5ss

29.2

-2.4

2.5

25.2

36.6

Minor BPS

54.7

0.14

1.8

65.1

41.5

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019