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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2267796_2271521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2267796 - 2271521

Intron Length:

3726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

ATCTCCATCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ATCTCCATCATA

Flanking Amino Acid:

LRLLRIFKVTKYWNSLRNLV

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

0.9

70.5

35.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

68.5

0.42

0.8

62.4

32.6

Minor 5ss

30.8

-2.2

2.8

33.9

34.8

Minor BPS

50.4

0.01

66.38

40.5

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019