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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2271654_2272552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2271654 - 2272552

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTA

5'SS Class:

major

3'SS Sequence:

TTACTTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

ALLGMQLFGGQFNFQDETPT

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

72.1

39.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.6

0.69

0.8

36.5

Minor 5ss

-1.1

55.9

42.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019