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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2272626_2277466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2272626 - 2277466

Intron Length:

4841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCCCTCTCAAAT

Flanking Amino Acid:

FPAAILTVFQILTGEDWNAV

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

84.5

0.78

0.8

80.7

31.3

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

50.7

0.1

1.7

66.47

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019