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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2283827_2288740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2283827 - 2288740

Intron Length:

4914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTGTCTTGATT

Flanking Amino Acid:

NLANAQELTKDEEEMEEATN

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

23.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

0.61

0.9

70.9

39.7

Minor 5ss

40.5

-1.1

2.7

50.7

45.7

Minor BPS

72.3

0.78

1.3

86.06

34.4

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019