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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2288848_2296022_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2288848 - 2296022

Intron Length:

7175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTAAGCGTT

5'SS Class:

major

3'SS Sequence:

TTTGCATGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTTTTTGCATG

Flanking Amino Acid:

PMSAANISIAAFVKQTRGTV

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.4

67.1

44.6

Major BPS

0.62

1.4

85.7

34.9

Major PPT

75.5

0.57

69.9

40.4

Minor 5ss

43.2

-0.7

3.5

Minor BPS

46.6

-0.4

1.9

55.96

40.2

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019