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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2288848_2304685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2288848 - 2304685

Intron Length:

15838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTAAGCGTT

5'SS Class:

major

3'SS Sequence:

CTCCCCTCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTGATACTAACT

Flanking Amino Acid:

PMSAANISIAAKQQNSSKSK

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.4

67.1

44.6

Major BPS

76.8

0.67

0.9

75.9

Major PPT

70.1

0.45

0.7

65.1

23.5

Minor 5ss

43.2

-0.7

3.5

Minor BPS

49.9

0.07

74.51

41.8

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006711

2102028 - 2375046

273019