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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2305508_2306749_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2305508 - 2306749

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTCAAAT

Flanking Amino Acid:

GEKEHRNHQPKENQCEIEAS

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

74.5

0.55

0.8

73.4

31.6

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

55.5

0.25

1.8

77.31

38.6

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019