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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2306965_2308876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2306965 - 2308876

Intron Length:

1912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTCGCATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTCCTTGAATT

Flanking Amino Acid:

APPGETTVIPMNNIEFESKT

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

75.5

0.57

0.9

39.1

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

71.3

0.75

1.3

86.4

33.1

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019