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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2312334_2313319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2312334 - 2313319

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TAATACTCATTT

Flanking Amino Acid:

PVQAESPRNDALKYLDYIFT

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

73.3

0.52

0.9

71.5

33.2

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

-0

1.9

67.79

42.6

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019