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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2313380_2314691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2313380 - 2314691

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTCTTCTGATGT

Flanking Amino Acid:

GVFTFEMVIKMIDLGLLLHP

Intron Amino Acid Position:

1120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.9

0.63

0.9

71.1

34.4

Minor 5ss

-1.7

3.8

55.2

Minor BPS

49.1

0.01

71.9

45.2

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019