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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2314799_2318486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2314799 - 2318486

Intron Length:

3688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

AATCTCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGAAT

U12 Branch Point Sequence:

TCTTGCTGGAAT

Flanking Amino Acid:

VSGALVAFAFSSFMGGTKGK

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

73.3

37.4

Major BPS

48.8

-0

1.5

44.6

Major PPT

72.3

0.5

0.9

63.4

38.5

Minor 5ss

37.5

-1.4

2.6

44.5

37.1

Minor BPS

49.3

0.03

2.1

72.94

43.9

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019