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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2314799_2322741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2314799 - 2322741

Intron Length:

7943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CTATACCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTATAC

U12 Branch Point Sequence:

TTTTCTTGTACC

Flanking Amino Acid:

VSGALVAFAFSGTKGKDINT

Intron Amino Acid Position:

1176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

73.3

37.4

Major BPS

56.8

0.17

1.1

54.9

40.5

Major PPT

76.9

0.6

0.9

69.9

Minor 5ss

37.5

-1.4

2.6

44.5

37.1

Minor BPS

64.4

0.43

1.8

79.46

35.6

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019