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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2318499_2322741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2318499 - 2322741

Intron Length:

4243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAATATGT

5'SS Class:

major

3'SS Sequence:

CTATACCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTATAC

U12 Branch Point Sequence:

TTTTCTTGTACC

Flanking Amino Acid:

LVAFAFSSFMGGTKGKDINT

Intron Amino Acid Position:

1159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

65.3

41.4

Major BPS

56.8

0.17

1.1

54.9

40.5

Major PPT

76.9

0.6

0.9

69.9

Minor 5ss

39.3

-1.2

3.1

48.2

47.3

Minor BPS

64.4

0.43

1.8

79.46

35.6

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019