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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2322839_2324797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2322839 - 2324797

Intron Length:

1959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAGAA

5'SS Class:

major

3'SS Sequence:

TTCCCATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

AGCCCCCTAACC

Flanking Amino Acid:

KTIKRLPKLKAVFDCVVNSL

Intron Amino Acid Position:

1192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

72.5

32.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

74.3

0.55

0.8

65.8

34.9

Minor 5ss

26.1

-2.7

Minor BPS

56.4

0.18

1.7

64.29

40.5

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019