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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2324959_2326147_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2324959 - 2326147

Intron Length:

1189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TTGGTCTGAACC

Flanking Amino Acid:

DESKELEKDCRGQYLDYEKN

Intron Amino Acid Position:

1245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

72.5

0.51

0.9

65.1

41.2

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

61.9

0.35

1.6

70.55

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019