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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2326286_2327166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2326286 - 2327166

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTACG

5'SS Class:

major

3'SS Sequence:

CGCTTGCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAC

U12 Branch Point Sequence:

ATTCCACTGACA

Flanking Amino Acid:

FTVSTGEGWPTVLKHSVDAT

Intron Amino Acid Position:

1291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

71.4

40.3

Major BPS

58.6

0.21

1.2

70.2

35.9

Major PPT

75.6

0.58

0.9

68.6

37.3

Minor 5ss

-2.1

2.6

34.1

33.8

Minor BPS

49.8

-0

1.9

68.96

36.2

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019