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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2327369_2328840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2327369 - 2328840

Intron Length:

1472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCCACG

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATCC

Flanking Amino Acid:

MSECSLEKNERACIDFAISA

Intron Amino Acid Position:

1359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

57.4

47.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

84.4

0.77

0.7

80.5

31.5

Minor 5ss

44.2

-0.6

2.9

58.7

45.6

Minor BPS

56.4

0.18

1.8

69.92

41.8

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019