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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2329006_2329763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2329006 - 2329763

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CATCCTGGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

CTTTCAGTAACA

Flanking Amino Acid:

ALNTIVLMMKFYDAPEAYEE

Intron Amino Acid Position:

1414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

68.2

42.9

Major BPS

0.37

1.3

76.1

Major PPT

0.32

61.6

39.6

Minor 5ss

28.4

-2.5

2.9

32.7

Minor BPS

57.3

0.23

2.3

76.36

40.9

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019