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Intron Name: Anas_platyrhynchos_platyrhynchos_18_233649_234369_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

233649 - 234369

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTCTCTTCATG

Flanking Amino Acid:

RFKVVGCAEMVENERLPEHE

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

78.7

35.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.6

0.62

0.8

73.9

Minor 5ss

35.3

-1.7

3.8

52.2

Minor BPS

58.5

0.12

1.8

68.07

40.1

Associated Gene:

Gene:

TRAF2

Ensembl Gene ID:

ENSAPLG00000016230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021928

226574 - 248228

21655

ENSAPLT00000016945

227574 - 248228

20655