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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2341277_2341901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2341277 - 2341901

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CTCTCCGTGACA

Flanking Amino Acid:

FFIYAIIGMQVFGNIALDDE

Intron Amino Acid Position:

1540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

68.4

0.42

63.8

36.9

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

57.6

0.23

2.1

69.92

42.9

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019