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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2341994_2343386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2341994 - 2343386

Intron Length:

1393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

ATGAGCTCACCC

Flanking Amino Acid:

TFLQALMLLFRSATGEAWHE

Intron Amino Acid Position:

1570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.7

90.9

28.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

71.5

0.48

0.8

65.3

30.5

Minor 5ss

39.3

-1.2

2.8

50.6

45.9

Minor BPS

42.9

-0.5

2.1

53.62

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019