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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2343538_2347001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2343538 - 2347001

Intron Length:

3464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

TCCTCCCTAATT

Flanking Amino Acid:

VSFIFLCSFLMLNLFVAVIM

Intron Amino Acid Position:

1621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

70.6

41.3

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

88.6

0.87

0.6

Minor 5ss

33.7

-1.9

2.9

38.1

40.9

Minor BPS

67.1

0.62

1.7

80.27

42.1

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019