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Intron Name: Anas_platyrhynchos_platyrhynchos_18_234445_236181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

234445 - 236181

Intron Length:

1737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGAC

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ATCTGTCTAACG

Flanking Amino Acid:

CGKKKIPREKFQDHVKTCGK

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

68.4

36.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

87.1

0.84

0.6

80.8

31.3

Minor 5ss

44.6

-0.6

60.6

44.5

Minor BPS

47.9

-0.3

2.1

57.92

Associated Gene:

Gene:

TRAF2

Ensembl Gene ID:

ENSAPLG00000016230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021928

226574 - 248228

21655

ENSAPLT00000016945

227574 - 248228

20655