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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2361965_2363371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2361965 - 2363371

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTGACG

Flanking Amino Acid:

RTALEIKLATGGVKQHQCDA

Intron Amino Acid Position:

1732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

100

1.24

0.5

100

Major PPT

85.5

0.8

0.7

83.9

24.3

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

73.2

0.59

1.7

80.28

35.3

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019