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Intron Name: Anas_platyrhynchos_platyrhynchos_18_236257_239051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

236257 - 239051

Intron Length:

2795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GATTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GATTCTTTTACA

Flanking Amino Acid:

KSLFYFPDIKAHDEVCPKFP

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.2

39.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

82.8

0.74

0.9

76.3

37.4

Minor 5ss

28.7

-2.4

3.4

37.6

47.2

Minor BPS

66.5

0.51

1.6

73.2

38.6

Associated Gene:

Gene:

TRAF2

Ensembl Gene ID:

ENSAPLG00000016230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021928

226574 - 248228

21655