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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2363480_2364746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2363480 - 2364746

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

CGTCCCTGGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

CTTCCCTCACCT

Flanking Amino Acid:

TLDLLVPPHKPDEMTVGKVY

Intron Amino Acid Position:

1768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.3

76.2

39.9

Major BPS

60.8

0.27

51.3

35.5

Major PPT

61.1

0.25

1.1

56.4

38.8

Minor 5ss

35.8

-1.6

3.3

48.4

41.2

Minor BPS

57.2

0.31

1.9

77.75

44.4

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019