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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2364860_2365531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2364860 - 2365531

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAGC

5'SS Class:

major

3'SS Sequence:

CTTTACTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTCTCTTTACTT

Flanking Amino Acid:

VHQPPGGLCQPGPVSLFHPL

Intron Amino Acid Position:

1806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

60.1

44.8

Major BPS

0.6

65.6

41.1

Major PPT

86.4

0.82

0.8

80.7

30.9

Minor 5ss

38.7

-1.3

3.1

52.7

Minor BPS

0.67

1.6

82.98

39.3

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019