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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2365660_2366798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2365660 - 2366798

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

GATCTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

TTCTCCTTGATC

Flanking Amino Acid:

SSASLNNGGTLPPPEGGIKE

Intron Amino Acid Position:

1848

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

71.5

0.53

1.1

43.2

Major PPT

70.2

0.45

65.8

40.6

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

79.5

0.91

1.1

81.48

33.4

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019

ENSAPLT00000030886

2102028 - 2375046

273019