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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2366926_2367469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2366926 - 2367469

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TGTTTCTTGATT

Flanking Amino Acid:

GHSEEIPIERVVEMREISPT

Intron Amino Acid Position:

1891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

63.4

0.3

1.1

62.8

47.1

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

77.3

0.94

87.23

31.9

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019