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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2372099_2372226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2372099 - 2372226

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGAGTT

5'SS Class:

major

3'SS Sequence:

GTTCTCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GCTTTGTTGACC

Flanking Amino Acid:

SPHQLADGEAVAQHGESSSK

Intron Amino Acid Position:

1997

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

70.4

40.2

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

82.7

0.74

0.8

73.6

36.9

Minor 5ss

35.8

-1.6

3.8

56.4

47.8

Minor BPS

0.08

2.1

65.57

40.7

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019