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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2372439_2374509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2372439 - 2374509

Intron Length:

2071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTTCATT

Flanking Amino Acid:

GGPEQGPHRQGSGSVNGSPL

Intron Amino Acid Position:

2068

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

100

1.24

0.5

100

Major PPT

74.4

0.55

0.9

67.4

43.1

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

62.8

0.48

1.7

81.14

35.2

Associated Gene:

Gene:

CACNA1B

Ensembl Gene ID:

ENSAPLG00000005963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030886

2102028 - 2375046

273019

ENSAPLT00000020946

2102028 - 2375046

273019

ENSAPLT00000006711

2102028 - 2375046

273019