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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2426498_2429317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2426498 - 2429317

Intron Length:

2820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTGAT

U12 Branch Point Sequence:

GGTGATGCAGCT

Flanking Amino Acid:

PGPPGPPGLPGCPGRRGLAG

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

49.3

-0

1.5

42.8

49.4

Major PPT

83.5

0.75

0.8

77.1

31.6

Minor 5ss

29.4

-2.4

3.2

40.9

45.4

Minor BPS

34.8

-1

2.2

50.55

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255