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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2434258_2436756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2434258 - 2436756

Intron Length:

2499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCGGGCTCACTC

Flanking Amino Acid:

PGEKGQRGYTGEPGLQGLPG

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

81.5

0.71

0.7

76.7

25.3

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

36.8

-1

36.97

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018083

2425365 - 2456619

31255

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255