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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2437009_2437748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2437009 - 2437748

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TGTGCCTCATCC

Flanking Amino Acid:

RGLAGEKGEEGFLGDPGPVG

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

0.74

0.8

73.9

36.8

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

52.5

0.06

1.9

67.5

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018083

2425365 - 2456619

31255

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255