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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2438280_2438689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2438280 - 2438689

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AAAGCCAAAAAA

Flanking Amino Acid:

MGFQGPAGPEGEGGPVGAAG

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

77.1

0.61

0.9

37.5

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

42.5

-0.5

50.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255