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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2438735_2438832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2438735 - 2438832

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCACCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

CATCGCTCACCT

Flanking Amino Acid:

VGAAGPAGPPGEPGQPGSVG

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

72.7

38.8

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

69.1

0.43

0.9

61.5

34.6

Minor 5ss

-1.7

2.9

45.5

42.6

Minor BPS

44.3

-0.3

2.2

62.78

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018083

2425365 - 2456619

31255

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255