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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2439016_2439285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2439016 - 2439285

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCCCCCACT

Flanking Amino Acid:

PGLPGPQGPKGPQGLQGRRG

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.4

0.55

0.9

70.2

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

49.4

0.04

2.3

78.28

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255