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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2439340_2439458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2439340 - 2439458

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AGCTGCTGAGCC

Flanking Amino Acid:

RGPPGLGGTQGPAGMEGSSG

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

27.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

82.6

0.73

0.8

77.1

31.6

Minor 5ss

33.7

-1.9

3.4

48.7

47.5

Minor BPS

-0.4

54.52

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018083

2425365 - 2456619

31255

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255