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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2439740_2440117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2439740 - 2440117

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

GTTTCTTTAACT

Flanking Amino Acid:

RGQLGQEGPGGFIGLPGSKG

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

74.7

0.61

65.9

40.9

Major PPT

61.9

0.27

1.7

73.7

36.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

88.8

1.3

0.9

96.8

27.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255