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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2440981_2441994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2440981 - 2441994

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGGCAA

U12 Branch Point Sequence:

CAAGGCGCAGCT

Flanking Amino Acid:

RGAAGARGPEGEEGQIGPAG

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

40.8

-0.5

1.3

40.8

41.4

Major PPT

0.56

0.7

24.7

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

32.8

-1.2

2.3

45.79

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255