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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2442827_2443342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2442827 - 2443342

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

ATTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TCTGCTTTGAGG

Flanking Amino Acid:

RGLVGVPGLPGSRGMPGAEG

Intron Amino Acid Position:

691

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

59.1

45.8

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

0.76

0.8

77.8

30.1

Minor 5ss

34.5

-1.8

3.2

47.6

41.5

Minor BPS

50.4

-0.1

1.8

57.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255