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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2444100_2444641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2444100 - 2444641

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

CTCCTTTCACCC

Flanking Amino Acid:

VGSPGRMGPPGFAGVQGGRG

Intron Amino Acid Position:

724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.4

37.7

Major BPS

77.7

0.69

30.2

Major PPT

81.1

0.7

72.4

32.3

Minor 5ss

30.1

-2.3

2.6

34.1

41.4

Minor BPS

44.3

-0.4

1.7

50.66

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255