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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2447568_2447814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2447568 - 2447814

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTGTCACCAACG

Flanking Amino Acid:

PGAAGPPGYPGREGPRGPEG

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

85.6

0.8

80.1

31.8

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

47.5

-0.3

2.2

62.04

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018083

2425365 - 2456619

31255

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255