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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2448843_2449024_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2448843 - 2449024

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAGC

5'SS Class:

major

3'SS Sequence:

CATCTCGGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTGTTTCCATCT

Flanking Amino Acid:

PGEPGTRGHKGDAGPRGLPG

Intron Amino Acid Position:

988

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.9

42.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

59.5

0.21

1.1

54.7

39.8

Minor 5ss

25.8

-2.8

3.2

33.4

42.1

Minor BPS

42.4

-0.5

59.76

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255

ENSAPLT00000018083

2425365 - 2456619

31255