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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2454605_2454739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2454605 - 2454739

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CACTGTCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TGTGTCACCACT

Flanking Amino Acid:

PGPRGKPGPPGLAGPPGPSG

Intron Amino Acid Position:

1336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

74.5

37.6

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

63.4

0.3

54.2

40.3

Minor 5ss

39.2

-1.2

2.9

49.4

46.6

Minor BPS

42.8

-0.4

2.2

65.41

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018083

2425365 - 2456619

31255

ENSAPLT00000017187

2426372 - 2456801

30430

ENSAPLT00000011420

2425365 - 2456619

31255