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Intron Name: Anas_platyrhynchos_platyrhynchos_18_2465161_2465529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2465161 - 2465529

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GCCTGCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGGGCGCTGACC

Flanking Amino Acid:

IQRILERVLKKYDYDSSTVR

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

65.2

0.34

0.9

56.9

33.6

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

42.7

-0.5

2.4

54.99

43.5

Associated Gene:

Gene:

NIBAN2

Ensembl Gene ID:

ENSAPLG00000011287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026810

2462141 - 2472156

10016

ENSAPLT00000023933

2462811 - 2471962

9152

ENSAPLT00000046971

2462141 - 2472156

10016

ENSAPLT00000020136

2462811 - 2472156

9346

ENSAPLT00000045164

2462141 - 2471962

9822

ENSAPLT00000011769

2462141 - 2474507

12367

ENSAPLT00000029396

2463306 - 2472156

8851